How much cadmium is contained in cocoa beans?

Cocoa beans are the main ingredients of chocolate, a famous "soul food". However, cocoa plants also absorb toxic heavy metals if the soils are polluted. At BESSY II, a team has now mapped the local distribution of heavy metals inside the beans.

Cocoa beans are the main ingredients of chocolate, a famous "soul food". However, cocoa plants also absorb toxic heavy metals if the soils are polluted. At BESSY II, a team has now mapped the local distribution of heavy metals inside the beans. © AdobeStock

X-ray microscopy images with the X-ray colour camera of a roasted cocoa bean. The distribution of iron (red), zinc (green) and rubidium (blue) shows the shell of the bean and its inner structures, the hypocotyl and cotyleidon veins.

X-ray microscopy images with the X-ray colour camera of a roasted cocoa bean. The distribution of iron (red), zinc (green) and rubidium (blue) shows the shell of the bean and its inner structures, the hypocotyl and cotyleidon veins. © HZB

Element distribution on a virtual section of a fermented cocoa bean using X-ray fluorescence CT. It is clearly visible that cadmium (Cd) is mainly found in the shell.

Element distribution on a virtual section of a fermented cocoa bean using X-ray fluorescence CT. It is clearly visible that cadmium (Cd) is mainly found in the shell. © HZB

Cocoa beans can absorb toxic heavy metals such as cadmium from the soil. Some cultivation areas, especially in South America, are polluted with these heavy metals, in some cases considerably. In combining different X-ray fluorescence techniques, a team at BESSY II has now been able to non-invasively measure for the first time where cadmium accumulates exactly in cocoa beans: Mainly in the shell. Further investigations show that the processing of the cocoa beans can have a great influence on the concentration of heavy metals.

People have been harvesting the beans of the cocoa bush for at least 5000 years. They have learned to ferment, roast, grind and process the beans with sugar and fat to make delicious chocolates. Today, around five million tonnes of beans are on the market every year, coming from only a few growing areas in tropical regions.

Soul food chocolate

Chocolate is considered a soul food: amino acids such as tryptophan brighten the mood. Cocoa beans also contain anti-inflammatory compounds and valuable trace elements. However, cocoa plants also absorb toxic heavy metals if the soils are polluted, for example by mining, which can gradually poison groundwater and soils.

Where do the toxic elements accumulate?

An important question is,  where exactly the heavy metals accumulate in the bean, whether rather in the shell or rather in the endosperm inside the bean. From the harvest to the raw material for chocolate, the beans undergo many steps of different treatments, which could possibly reduce the contamination. And ideally the treatment could be optimised in order to make sure that the heavy metals are reduced but the desirable trace elements are retained.

Mapping the beans at BESSY II

A team led by Dr. Ioanna Mantouvalou (HZB) and Dr. Claudia Keil (TU Berlin/Toxicology) has now combined various imaging methods at the BAMline of BESSY II to precisely map the heavy metal concentrations in cocoa beans. They examined cocoa samples from a cultivation region in Colombia, which were contaminated with an average of 4.2 mg/kg cadmium. This is well above the European limits of 0.1-0.8 mg cadmium/kg in cocoa products.

The team worked with three different X-ray fluorescence techniques to examine the cocoa beans. Among other things, they developed a new analytical method for absorption correction when imaging with an X-ray colour camera. "There has been little understanding of how cadmium migrates from the soil through roots into the plant and where the element accumulates in the beans. Especially because it was not possible to precisely localise the cadmium content non-invasively," says Mantouvalou. PhD students Frank Förste (TU Berlin) and Leona Bauer (TU Berlin and HZB) carried out the experiments.

Detecting Cadmium

Cadmium is particularly difficult to detect, explains Mantouvalou. This is because the cadmium signal, which produces the excitation of the outer electrons, lies exactly below the much stronger fluorescence signal of the element potassium, which occurs in higher concentrations in cocoa. "We therefore excite a deeper electron shell of the cadmium atom, which is only possible with hard X-rays at the BAMLine," says Frank Förste. "This enabled us to map the cross-sections of cocoa beans with high resolution, and show that cadmium predominantly accumulates in the outer shell," says Leona Bauer.

Differences before and after roasting

They also discovered interesting differences between beans before and after the roasting process: "We were able to prove that roasting changes the element distribution in the beans," says Mantouvalou. The combination of the different experimental methods allows for the first time to precisely measure the accumulation of cadmium. Further investigations could systematically explore how to improve the processing steps in order to minimise the exposure.

arö

  • Copy link

You might also be interested in

  • BESSY II: High-resolution insights into individual biomolecules and catalysts
    Science Highlight
    15.09.2026
    BESSY II: High-resolution insights into individual biomolecules and catalysts
    Very small biological samples and even individual biomolecules can now be examined under near-physiological conditions with high confidence at the BESSY II infrared beamline with a newly validated and improved technique: The nanoscale infrared spectroscopy (s-SNOM) with ultra-thin silicon-based membranes. An international team demonstrated after an initial proof of concept, that high-resolution (a few tens of nanometres) nano-IR measurements reliably match expected far-field IR spectra in an aqueous environment. This methodological advance provides a solid foundation for studying biomaterials or observing catalytic processes in a liquid environment.
  • New method shows how molecular switches are influenced by their neighbors
    Science Highlight
    11.09.2026
    New method shows how molecular switches are influenced by their neighbors
    Researchers at Friedrich Schiller University Jena and the Helmholtz Centre Berlin (HZB) have, for the first time, been able to directly observe how the environment surrounding a molecular switch influences its electronic structure. Molecular switches are molecules that can be switched between two states by external influences such as changes in temperature—similar to a switch with the positions »On« and »Off«. Such molecules are being investigated as potential building blocks for future data storage devices or sensor materials. Using magnetic-field-dependent terahertz spectroscopy, the researchers have now, for the first time, been able to distinguish whether neighbouring molecules in a material are in the same or different states. The results have been published in the journal »Angewandte Chemie International Edition«.
  • SEAlab accelerator project completed: Achievements and outlook
    Interview
    10.09.2026
    SEAlab accelerator project completed: Achievements and outlook
    The SEAlab accelerator project successfully completed its final measurement campaign in summer 2026. The facility is now being dismantled, with many components set to be reused. The two accelerator physicists, Axel Neumann and Thorsten Kamps, explain what the project has achieved and provide an outlook for the future.